BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D02SP1|AL427303
(674 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1325 0.0
>3x_Contig1604
Length = 15703
Score = 1325 bits (667), Expect = 0.0
Identities = 671/674 (99%)
Strand = Plus / Plus
Query: 1 attggatgtngagatgtgcagtgccatcttgcccacattgcaagaatatgccaagagtac 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9150 attggatgttgagatgtgcagtgccatcttgcccacattgcaagaatatgccaagagtac 9209
Query: 61 cgttaacaatgttgttatcttgaactcttcagctagtcctagggccttctgttcaggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9210 cgttaacaatgttgttatcttgaactcttcagctagtcctagggccttctgttcaggtgg 9269
Query: 121 cgatgtagctcaagtagccaagttggttaaggaaggaaattttgattacgctagagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9270 cgatgtagctcaagtagccaagttggttaaggaaggaaattttgattacgctagagaatt 9329
Query: 181 tttcaccaaggaatactcgttaaacttggctctagctacgctgaacaagccggtcatctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9330 tttcaccaaggaatactcgttaaacttggctctagctacgctgaacaagccggtcatctc 9389
Query: 241 tatcatggacggtatcaccatgggtggtggtgtcggtctatctactcatattccattccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9390 tatcatggacggtatcaccatgggtggtggtgtcggtctatctactcatattccattccg 9449
Query: 301 tattgctactgaaaawactcgttgggccatgcctgaratggatattggattcttcccaga 360
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9450 tattgctactgaaaatactcgttgggccatgcctgagatggatattggattcttcccaga 9509
Query: 361 tgtcggtgccactttctctattccaaagcttaccactgttggtggttccaacggacaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9510 tgtcggtgccactttctctattccaaagcttaccactgttggtggttccaacggacaatt 9569
Query: 421 ggctcagtacttgtgcatgactggtgacattttgaatggtgccgatgcttacgtggctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9570 ggctcagtacttgtgcatgactggtgacattttgaatggtgccgatgcttacgtggctgg 9629
Query: 481 tgtcgcttctcattatgtgccacatgatcagatctccaacttacaggcaagattggctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9630 tgtcgcttctcattatgtgccacatgatcagatctccaacttacaggcaagattggctga 9689
Query: 541 gttacatttgactgaagccacttctcaatcgactaaccgtgatgatgaaattttcgatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9690 gttacatttgactgaagccacttctcaatcgactaaccgtgatgatgaaattttcgatgt 9749
Query: 601 tgtcaaccatgctattgaggaattcaacgcaccattaccaagagactacaagttcaagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9750 tgtcaaccatgctattgaggaattcaacgcaccattaccaagagactacaagttcaagta 9809
Query: 661 cactgctgatgaac 674
||||||||||||||
Sbjct: 9810 cactgctgatgaac 9823
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4112
Number of Sequences: 1807
Number of extensions: 4112
Number of successful extensions: 101
Number of sequences better than 1.0e-20: 1
length of query: 674
length of database: 10,358,551
effective HSP length: 16
effective length of query: 658
effective length of database: 10,329,639
effective search space: 6796902462
effective search space used: 6796902462
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)